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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001212Keratin 5; Belongs to the intermediate filament family. (533 aa)    
Predicted Functional Partners:
LOC103139106
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.867
bag3
BCL2 associated athanogene 3.
    
 0.652
LOC103132215
Ubiquitin-like domain-containing protein.
    
  0.640
rps27a
Ribosomal protein S27a.
    
  0.640
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.614
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.595
LOC103153586
Runt-related transcription factor.
    
  0.586
LOC103130586
Runt-related transcription factor.
    
  0.586
ENSPFOP00000013771
Runt domain-containing protein.
    
  0.586
ENSPFOP00000016177
Runt-related transcription factor.
    
  0.586
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.