Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
farsaPhenylalanyl-tRNA synthetase subunit alpha. (497 aa)    
Predicted Functional Partners:
ENSPFOP00000000975
Leucine rich repeat containing 47.
  
 0.998
ENSPFOP00000018153
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.954
yars1
Tyrosine--tRNA ligase.
  
  
 0.945
fars2
Phenylalanyl-tRNA synthetase 2, mitochondrial.
   
 
0.932
ENSPFOP00000027979
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 
  0.914
vars2
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.886
dhps
Deoxyhypusine synthase.
   
  
 0.823
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
 0.809
kars1
Lysine--tRNA ligase.
  
  
 0.805
rc3h1
Ring finger and CCCH-type domains 1b.
    
   0.791
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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