Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001228NACHT and WD repeat domain containing 1. (1562 aa)    
Predicted Functional Partners:
ENSPFOP00000015912
WD repeat domain 90.
    
  0.714
ENSPFOP00000004125
Uncharacterized protein.
   
   0.710
nlrx1
NLR family member X1.
    
 
 0.698
LOC103144375
DUF4201 domain-containing protein.
    
   0.690
ENSPFOP00000002482
NYD-SP28 domain-containing protein.
   
   0.690
ENSPFOP00000009001
Zinc finger, MYND-type containing 12.
    
   0.690
ENSPFOP00000016806
Uncharacterized protein.
    
   0.690
CFAP43
Cilia and flagella associated protein 43.
    
 
 0.687
ENSPFOP00000011350
PARK2 co-regulated.
    
   0.672
ints11
Integrator complex subunit 11.
    
 0.669
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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