Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lgalslGalectin. (179 aa)    
Predicted Functional Partners:
ENSPFOP00000021422
TBC1 domain family, member 31.
      
 0.624
ralgapa2
Ral GTPase activating protein, alpha subunit 2 (catalytic).
      
 0.578
lyrm9
LYR motif containing 9; Belongs to the complex I LYR family.
      
 0.550
mrs2
Magnesium transporter.
      
 0.546
itgb1bp1
Integrin beta 1 binding protein 1.
      
 0.546
castor2
Cytosolic arginine sensor for mTORC1 subunit 2.
      
 0.488
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
      
 0.488
LOC103145659
Ubiquitin associated and SH3 domain containing Ba.
      
 0.407
auts2
Activator of transcription and developmental regulator AUTS2 a.
      
 0.407
ENSPFOP00000017036
Ubiquitin associated and SH3 domain containing Bb.
      
 0.407
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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