STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc22Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (277 aa)    
Predicted Functional Partners:
ENSPFOP00000006876
Zinc finger protein 106a.
    
 0.692
LOC103147857
Family with sequence similarity 163 member B, genome duplicate a.
   
  
 0.634
zdhhc4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.621
coq6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
      
 0.614
pot1
Telo_bind domain-containing protein.
    
 0.601
abhd10
Transgelin 3b.
      
 0.578
zdhhc7
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.575
zdhhc23
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.569
msh4
MutS homolog 4.
      
 0.567
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
   
  
 0.559
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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