STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146059Calcium and integrin binding family member 3. (187 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.860
ENSPFOP00000015459
Transmembrane channel-like protein.
    
 0.860
ENSPFOP00000018095
Transmembrane channel-like protein.
    
 0.860
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.803
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.803
ENSPFOP00000007957
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.684
ENSPFOP00000011137
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.684
LOC103139106
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.647
ENSPFOP00000006932
Xeroderma pigmentosum, complementation group C.
    
 0.646
ENSPFOP00000002799
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.624
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.