Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152445PHD finger protein 1. (360 aa)    
Predicted Functional Partners:
jarid2
Jumonji, AT rich interactive domain 2b.
    
 0.950
eed
Embryonic ectoderm development.
   
 0.942
ints1
Integrator complex subunit 1.
    
 0.927
LOC103137767
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.926
LOC103146910
VEFS-Box domain-containing protein.
   
 0.926
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.921
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.921
LOC103129685
WD_REPEATS_REGION domain-containing protein.
   
 0.903
ENSPFOP00000008113
Retinoblastoma binding protein 4.
   
 0.903
ENSPFOP00000009990
Integrator complex subunit 3.
    
 0.868
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.