Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103150417Transmembrane 6 superfamily member 2. (381 aa)    
Predicted Functional Partners:
tspan33
Tetraspanin.
      
 0.592
LOC103139193
Transmembrane protein 182b.
      
 0.499
tmem182
Transmembrane protein 182a.
      
 0.499
LOC103144338
Uncharacterized protein.
      
 0.498
mxra8
Matrix-remodelling associated 8b.
      
 0.498
TIMM22
Translocase of inner mitochondrial membrane 22.
      
 0.464
LOC103131758
Patatin-like phospholipase domain containing 3.
      
 0.462
LOC103141998
AMP-binding domain-containing protein.
      
 0.457
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
      
 0.457
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
      
 0.408
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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