Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000001126 | wdcp | ENSPFOP00000001126 | ENSPFOP00000001249 | Ephrin-B3a; Belongs to the ephrin family. | WD repeat and coiled coil containing. | 0.405 |
ENSPFOP00000017355 | wdcp | ENSPFOP00000017355 | ENSPFOP00000001249 | NudC domain containing 1. | WD repeat and coiled coil containing. | 0.489 |
ruvbl1 | ruvbl2 | ENSPFOP00000030942 | ENSPFOP00000012242 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.999 |
ruvbl1 | wdcp | ENSPFOP00000030942 | ENSPFOP00000001249 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | WD repeat and coiled coil containing. | 0.594 |
ruvbl2 | ruvbl1 | ENSPFOP00000012242 | ENSPFOP00000030942 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.999 |
ruvbl2 | wdcp | ENSPFOP00000012242 | ENSPFOP00000001249 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | WD repeat and coiled coil containing. | 0.585 |
wdcp | ENSPFOP00000001126 | ENSPFOP00000001249 | ENSPFOP00000001126 | WD repeat and coiled coil containing. | Ephrin-B3a; Belongs to the ephrin family. | 0.405 |
wdcp | ENSPFOP00000017355 | ENSPFOP00000001249 | ENSPFOP00000017355 | WD repeat and coiled coil containing. | NudC domain containing 1. | 0.489 |
wdcp | ruvbl1 | ENSPFOP00000001249 | ENSPFOP00000030942 | WD repeat and coiled coil containing. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.594 |
wdcp | ruvbl2 | ENSPFOP00000001249 | ENSPFOP00000012242 | WD repeat and coiled coil containing. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.585 |