Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103149614Myosin binding protein Ha. (519 aa)    
Predicted Functional Partners:
LOC103134607
Myosin binding protein Hb.
  
  
 
0.901
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.889
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
      
 0.810
ENSPFOP00000014263
Oculocutaneous albinism II.
      
 0.715
mocs1
Molybdenum cofactor synthesis 1.
      
 0.682
ENSPFOP00000003169
Uncharacterized protein.
      
 0.680
LOC103139979
Uncharacterized protein.
      
 0.678
pter
Phosphotriesterase related.
      
 0.632
nectin4
Uncharacterized protein.
      
 0.574
LOC103152299
Receptor expression-enhancing protein.
      
 0.553
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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