Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC103156806Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (227 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.920
eif4g3
Eukaryotic translation initiation factor 4 gamma, 3a.
   
 0.912
ENSPFOP00000009203
Uncharacterized protein.
   
 0.890
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.890
ENSPFOP00000014516
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.887
ENSPFOP00000011912
Eukaryotic translation initiation factor 4, gamma 2a.
   
 0.884
ENSPFOP00000015751
Eukaryotic translation initiation factor 4, gamma 2b.
   
 0.884
ENSPFOP00000004469
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
   
 0.848
LOC103148870
Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family.
   
 0.848
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.818
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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