Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103141745Orthopedia homeobox b. (317 aa)    
Predicted Functional Partners:
ALX3
ALX homeobox 3.
   
  
 0.874
arx
Aristaless related homeobox a.
   
  
 0.843
uncx
UNC homeobox.
   
  
 0.809
LOC103136450
Unc4.1 homeobox (C. elegans).
   
  
 0.809
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.643
ENSPFOP00000006932
Xeroderma pigmentosum, complementation group C.
    
 
 0.643
fam207a
Family with sequence similarity 207 member A.
    
   0.570
ENSPFOP00000015912
WD repeat domain 90.
    
   0.554
nhlh2
Nescient helix loop helix 2.
   
 0.548
xrcc5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
   0.542
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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