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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001264Si:ch73-132f6.5. (620 aa)    
Predicted Functional Partners:
ENSPFOP00000005273
Malate synthase-like.
  
 0.882
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.684
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.684
LOC103131426
Cytochrome b5 reductase 4.
    
  0.676
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.640
LOC103146444
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.638
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.590
suox
Sulfite oxidase.
    
 0.587
tk1
Thymidine kinase.
    
 0.580
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.577
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.