Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001267Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
ints1
Integrator complex subunit 1.
    
 0.602
ints11
Integrator complex subunit 11.
    
 0.594
ENSPFOP00000012308
Integrator complex subunit 9.
    
 0.594
ENSPFOP00000023797
Integrator complex subunit 4.
    
 0.579
ints13
Integrator complex subunit 13.
    
 0.578
ENSPFOP00000009990
Integrator complex subunit 3.
    
 0.572
ints7
Integrator complex subunit 7.
    
 0.572
ints10
Integrator complex subunit 10.
    
 0.569
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.436
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.417
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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