Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001276Collagen, type VIII, alpha 2. (691 aa)    
Predicted Functional Partners:
agtpbp1
ATP/GTP binding protein 1.
      
 0.646
ENSPFOP00000021164
5'-nucleotidase domain containing 1.
      
 0.619
ENSPFOP00000030181
Uncharacterized protein.
      
 0.619
ENSPFOP00000000611
Collagen, type VIII, alpha 1b.
     
  0.600
COL8A1
Collagen type VIII alpha 1 chain.
     
  0.600
ENSPFOP00000013824
C-type lectin domain-containing protein.
  
 
  0.534
COLEC10
Collectin subfamily member 10.
  
 
  0.531
LOC103155051
Tyrosine-protein kinase.
    
 0.531
slc4a11
Solute carrier family 4 member 11.
      
 0.500
SLC4A11
Solute carrier family 4 member 11.
      
 0.500
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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