Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cipcCLOCK-interacting pacemaker a. (358 aa)    
Predicted Functional Partners:
LOC103137774
Clock circadian regulator b.
    
 0.868
CLOCK
Clock circadian regulator a.
    
 0.868
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.865
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.865
LOC103133689
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.865
ENSPFOP00000019554
Neuronal PAS domain protein 2.
    
 0.837
LOC103144467
Circadian associated repressor of transcription a.
      
 0.625
itgb1bp1
Integrin beta 1 binding protein 1.
      
 0.587
LOC103143449
Uncharacterized protein.
    
   0.540
ENSPFOP00000025287
Uncharacterized protein.
    
   0.540
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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