Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103130561Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1229 aa)    
Predicted Functional Partners:
exoc4
Exocyst complex component 4.
   
 0.829
LOC103155165
RAB11B, member RAS oncogene family, a.
   
 0.800
LOC103155167
RAB11B, member RAS oncogene family, b.
   
 0.800
LOC103131161
RAB11a, member RAS oncogene family.
   
 0.800
LOC103150818
RAB11a, member RAS oncogene family, like.
   
 0.800
LOC103147000
Uncharacterized protein.
   
 0.800
LOC103132535
Dilute domain-containing protein.
 
     0.780
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
  0.775
LOC103129465
Melanophilin a.
    
 0.766
exoc5
Exocyst complex component 5.
    
 0.737
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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