STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103130561Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1229 aa)    
Predicted Functional Partners:
LOC103155165
RAB11B, member RAS oncogene family, a.
   
 0.786
LOC103155167
RAB11B, member RAS oncogene family, b.
   
 0.786
LOC103131161
RAB11a, member RAS oncogene family.
   
 0.786
LOC103150818
RAB11a, member RAS oncogene family, like.
   
 0.786
LOC103147000
Uncharacterized protein.
   
 0.786
LOC103132535
Dilute domain-containing protein.
 
     0.780
exoc4
Exocyst complex component 4.
    
 0.726
rab11fip2
RAB11 family interacting protein 2 (class I).
   
 0.697
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.697
calm2-2
Calmodulin.
    
 0.697
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.