Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103134861Doublesex and mab-3 related transcription factor 1. (293 aa)    
Predicted Functional Partners:
ENSPFOP00000000995
Anti-Mullerian hormone.
      
 0.924
msh4
MutS homolog 4.
      
 0.900
sox9
SRY-box transcription factor 9b.
    
 0.841
zbtb16
Zinc finger and BTB domain containing 16a.
    
 0.814
LOC103143639
SRY-box transcription factor 9.
    
 0.809
ENSPFOP00000013977
Synaptonemal complex protein 3.
    
 0.792
wdr24
WD repeat domain 24.
    
 0.786
pgk1
Phosphoglycerate kinase.
   
  
 0.767
kptn
Kaptin (actin binding protein).
    
 0.762
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.758
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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