Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103135484Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.969
trip12
Thyroid hormone receptor interactor 12.
   
 0.962
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.956
LOC103139106
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.951
ubb
Ubiquitin B.
   
 0.950
brca1
Uncharacterized protein.
    
 0.922
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.914
LOC103137255
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
   
 0.914
uba6
Ubiquitin like modifier activating enzyme 6.
   
 0.914
anapc11
APC11 anaphase promoting complex subunit 11 homolog (yeast).
    
 0.906
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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