STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtss1IMD domain-containing protein. (787 aa)    
Predicted Functional Partners:
gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.751
ENSPFOP00000007215
Uncharacterized protein.
      
 0.689
LOC103145773
RAB7a, member RAS oncogene family.
    
  0.530
LOC103143223
Uncharacterized protein.
    
  0.530
ENSPFOP00000004087
SATB homeobox 1b.
    
 
 0.528
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.492
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.474
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.474
ENSPFOP00000005869
Vac14 homolog (S. cerevisiae).
    
 
 0.458
ENSPFOP00000015763
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.457
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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