Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001302Forkhead box P1b. (399 aa)    
Predicted Functional Partners:
AANAT
Arylalkylamine N-acetyltransferase 1.
      
 0.676
LOC103156611
MyoD family inhibitor domain containing.
      
 0.638
LOC103153586
Runt-related transcription factor.
    
 0.637
LOC103130586
Runt-related transcription factor.
    
 0.637
ENSPFOP00000016177
Runt-related transcription factor.
    
 0.637
ENSPFOP00000011821
PR domain containing 14.
    
 0.626
sox5
SRY-box transcription factor 5.
    
 
 0.615
etv1
Ets variant 1.
    
 
 0.594
ENSPFOP00000013771
Runt domain-containing protein.
    
 0.586
cbfb
Core-binding factor subunit beta.
    
 0.573
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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