Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001312Tumor protein p63 regulated 1. (296 aa)    
Predicted Functional Partners:
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.924
ENSPFOP00000009492
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.828
rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.827
LOC103148541
Serine and arginine rich splicing factor 1a.
   
 0.766
ENSPFOP00000009592
Uncharacterized protein.
   
 0.766
LOC103140933
Uncharacterized protein.
   
 0.766
LOC103149198
Serine and arginine rich splicing factor 9.
   
 0.766
ENSPFOP00000011111
G protein-coupled receptor 153.
    
 0.743
magoh
Mago homolog, exon junction complex subunit.
   
 0.737
snrnp70
Small nuclear ribonucleoprotein 70 (U1).
   
 0.697
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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