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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001313Doublesex and mab-3 related transcription factor 3a. (475 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.836
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.835
ENSPFOP00000014268
DEP domain containing 5.
   
 0.814
wdr59
WD repeat domain 59.
    
 0.809
wdr24
WD repeat domain 24.
    
 0.809
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.801
ENSPFOP00000004202
X-ray repair complementing defective repair in Chinese hamster cells 4.
    
 0.692
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.692
ENSPFOP00000017313
X-ray repair complementing defective repair in Chinese hamster cells 4.
    
 0.692
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.692
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.