Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001329Zinc finger, FYVE domain containing 28. (984 aa)    
Predicted Functional Partners:
ENSPFOP00000001125
RNA binding motif protein 46.
      
 0.883
ENSPFOP00000016945
Regulatory associated protein of MTOR, complex 1.
    
   0.878
exd3
Exonuclease 3'-5' domain containing 3.
      
 0.795
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
   0.780
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
   0.780
LOC103142590
Si:dkey-97o5.1.
      
 0.647
ENSPFOP00000000354
Ring finger protein 103.
      
 0.608
SLITRK1
SLIT and NTRK like family member 1.
   
  
 0.562
cdadc1
Cytidine and dCMP deaminase domain containing 1.
      
 0.501
ENSPFOP00000005490
Myb/SANT-like DNA-binding domain containing 1.
      
 0.499
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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