lsm5 protein (Poecilia formosa) - STRING interaction network

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lsm5

U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)

Predicted Functional Partners:

lsm4

0.999

lsm2

0.999

lsm3

0.999

lsm6

0.999

lsm8

0.999

ENSPFOP00000012479

0.999

lsm1

0.999

snrpe

0.996

ENSPFOP00000021005

0.996

sart3

0.995

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000012479	ENSPFOP00000021005	ENSPFOP00000012479	ENSPFOP00000021005	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Sm domain-containing protein.	0.995
ENSPFOP00000012479	lsm1	ENSPFOP00000012479	ENSPFOP00000016084	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
ENSPFOP00000012479	lsm2	ENSPFOP00000012479	ENSPFOP00000001535	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSPFOP00000012479	lsm3	ENSPFOP00000012479	ENSPFOP00000008335	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
ENSPFOP00000012479	lsm4	ENSPFOP00000012479	ENSPFOP00000000513	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSPFOP00000012479	lsm5	ENSPFOP00000012479	ENSPFOP00000001333	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
ENSPFOP00000012479	lsm6	ENSPFOP00000012479	ENSPFOP00000008834	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
ENSPFOP00000012479	lsm8	ENSPFOP00000012479	ENSPFOP00000012341	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSPFOP00000012479	sart3	ENSPFOP00000012479	ENSPFOP00000010463	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.995
ENSPFOP00000012479	snrpe	ENSPFOP00000012479	ENSPFOP00000004632	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
ENSPFOP00000021005	ENSPFOP00000012479	ENSPFOP00000021005	ENSPFOP00000012479	Sm domain-containing protein.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.995
ENSPFOP00000021005	lsm1	ENSPFOP00000021005	ENSPFOP00000016084	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.847
ENSPFOP00000021005	lsm2	ENSPFOP00000021005	ENSPFOP00000001535	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
ENSPFOP00000021005	lsm3	ENSPFOP00000021005	ENSPFOP00000008335	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.987
ENSPFOP00000021005	lsm4	ENSPFOP00000021005	ENSPFOP00000000513	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
ENSPFOP00000021005	lsm5	ENSPFOP00000021005	ENSPFOP00000001333	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.996
ENSPFOP00000021005	lsm6	ENSPFOP00000021005	ENSPFOP00000008834	Sm domain-containing protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.988
ENSPFOP00000021005	lsm8	ENSPFOP00000021005	ENSPFOP00000012341	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
ENSPFOP00000021005	sart3	ENSPFOP00000021005	ENSPFOP00000010463	Sm domain-containing protein.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.417
ENSPFOP00000021005	snrpe	ENSPFOP00000021005	ENSPFOP00000004632	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999