Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrig1Leucine-rich repeats and immunoglobulin-like domains 1. (1050 aa)    
Predicted Functional Partners:
ENSPFOP00000029385
Ret proto-oncogene receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.851
lrig3
Leucine-rich repeats and immunoglobulin-like domains 3.
   
   0.837
lrig2
Leucine-rich repeats and immunoglobulin-like domains 2.
   
   0.837
mst1r
Macrophage stimulating 1 receptor b.
    
 0.810
LOC103150629
MET proto-oncogene, receptor tyrosine kinase.
    
 0.810
LOC103137246
Macrophage stimulating 1 receptor a.
    
 0.810
met
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.810
ENSPFOP00000007841
Receptor protein-tyrosine kinase.
    
 0.707
LOC103143265
Protein kinase domain-containing protein.
    
 0.704
ENSPFOP00000002762
Receptor protein-tyrosine kinase.
    
 0.704
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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