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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigkGPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. (383 aa)    
Predicted Functional Partners:
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
   
 0.999
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
    
 0.999
ENSPFOP00000018421
Phosphatidylinositol glycan anchor biosynthesis, class S.
   
 0.999
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
    
 0.998
ENSPFOP00000011585
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
    
 0.981
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
   
 
 0.980
ENSPFOP00000005563
Phosphatidylinositol glycan anchor biosynthesis, class O.
    
 0.975
LOC103150091
Peptidoglycan recognition protein 2.
    
 0.972
ENSPFOP00000005125
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.885
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.873
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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