Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146060RAB8A, member RAS oncogene family. (206 aa)    
Predicted Functional Partners:
micall2
Mical-like 2a.
    
 0.940
LOC103136448
Mical-like 2b.
    
 0.940
sqstm1
Sequestosome 1.
    
 0.918
ENSPFOP00000004104
Uncharacterized protein.
  
  
 
0.900
LOC103151864
Rab interacting lysosomal protein-like 2.
   
 
 0.822
exoc4
Exocyst complex component 4.
    
 0.812
exoc5
Exocyst complex component 5.
   
 0.808
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.805
exoc1
Exocyst complex component 1.
    
 0.794
ENSPFOP00000012483
RAB3A interacting protein (rabin3)-like 1.
    
 0.789
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (20%) [HD]