close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)    
Predicted Functional Partners:
trappc6a
Trafficking protein particle complex 6b-like.
   
 0.999
ENSPFOP00000007796
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.999
trappc10
Trafficking protein particle complex 10.
    
 0.999
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
trappc11
Trafficking protein particle complex 11.
    
 0.998
trappc12
Trafficking protein particle complex 12.
    
 0.995
trappc13
Trafficking protein particle complex 13.
    
 0.986
TRAPPC9
Trafficking protein particle complex 9.
    
 0.983
ENSPFOP00000004121
Trafficking protein particle complex 2.
    
 0.979
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.