Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001347Fras1 related extracellular matrix 1a. (1800 aa)    
Predicted Functional Partners:
LOC103149452
FRAS1 related extracellular matrix 2b.
  
0.930
ENSPFOP00000016663
FRAS1 related extracellular matrix 2a.
  
0.922
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.908
ENSPFOP00000003541
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.906
npnt
Nephronectin a.
    
 0.832
ENSPFOP00000027842
C-type lectin domain-containing protein.
 
   0.748
LOC103153225
Uncharacterized protein.
     
  0.592
ca5a
Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family.
      
 0.571
mfsd12
Major facilitator superfamily domain containing 12a.
     
 0.550
ENSPFOP00000024583
Uncharacterized protein.
      
 0.550
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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