STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103131970NACHT domain-containing protein. (885 aa)    
Predicted Functional Partners:
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.537
ENSPFOP00000015912
WD repeat domain 90.
   
   0.521
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.505
ENSPFOP00000029972
Ig-like domain-containing protein.
  
 
   0.428
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.415
ENSPFOP00000022852
Ig-like domain-containing protein.
  
 
   0.410
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.