STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152269Neurotrophin receptor associated death domain. (399 aa)    
Predicted Functional Partners:
ENSPFOP00000009530
Nerve growth factor receptor a (TNFR superfamily, member 16).
  
  
 
0.909
ngfr
Nerve growth factor receptor b.
  
  
 
0.907
ENSPFOP00000020257
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
     
  0.900
LOC103134588
Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.
     
  0.900
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
  0.650
FGF6
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
  0.650
LOC103129920
Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.
     
  0.650
ENSPFOP00000000734
Neurturin.
     
  0.650
LOC103156865
Ephrin-A5a; Belongs to the ephrin family.
     
  0.650
LOC103139881
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
  0.650
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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