Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103133047SIX homeobox 7. (260 aa)    
Predicted Functional Partners:
LOC103154963
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.677
ENSPFOP00000010703
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.677
eya1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.677
LOC103150130
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.677
ENSPFOP00000022644
Paired domain-containing protein.
  
 
 0.533
ENSPFOP00000026318
Paired domain-containing protein.
  
  
 0.532
LOC103147347
Opsin 1 (cone pigments), short-wave-sensitive 2.
      
 0.493
dlx1
Distal-less homeobox 1a.
   
  
 0.486
ENSPFOP00000022875
Ventral anterior homeobox 2.
   
 
 0.469
opn1sw
Opsin 1 (cone pigments), short-wave-sensitive 1.
      
 0.466
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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