Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103155887LON peptidase N-terminal domain and ring finger 1. (587 aa)    
Predicted Functional Partners:
LOC103132650
Tumor protein p53 binding protein, 1.
    
 0.756
ENSPFOP00000005659
Nei-like DNA glycosylase 1.
      
 0.713
rps27a
Ribosomal protein S27a.
   
  0.673
UBE2N
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.671
LOC103129309
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.671
ubb
Ubiquitin B.
    
 0.662
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.648
ENSPFOP00000006107
Zgc:66475.
     
 0.608
LOC103149879
Cryptochrome circadian regulator 5.
     
 0.608
LOC103132215
Ubiquitin-like domain-containing protein.
   
  0.594
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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