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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155887LON peptidase N-terminal domain and ring finger 1. (587 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
  0.807
ubb
Ubiquitin B.
    
 0.800
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.783
LOC103132650
Tumor protein p53 binding protein, 1.
    
 0.779
LOC103132215
Ubiquitin-like domain-containing protein.
   
  0.714
brca1
Uncharacterized protein.
    
 0.691
ENSPFOP00000005078
BRCA1 associated RING domain 1.
   
 0.691
UBE2N
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.691
LOC103129309
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.691
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.690
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.