Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103129746Guanylate cyclase activator 1d. (189 aa)    
Predicted Functional Partners:
ENSPFOP00000003589
Guanylate cyclase.
   
 0.800
ENSPFOP00000005849
Guanylate cyclase.
   
 0.795
ENSPFOP00000014265
Guanylate cyclase.
   
 0.795
ENSPFOP00000007315
Si:dkey-44k1.5.
    
 0.779
ENSPFOP00000008313
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
    
 0.779
gpatch3
G patch domain containing 3.
      
 0.686
ENSPFOP00000020555
Si:dkeyp-86h10.3.
      
 0.679
LOC103145650
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.646
LOC103140936
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.639
LOC103146603
Uncharacterized protein.
    
 0.616
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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