Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001385TIR domain-containing protein. (359 aa)    
Predicted Functional Partners:
ENSPFOP00000002808
Interleukin 1 receptor accessory protein-like 2.
 
      0.549
dstyk
Dual serine/threonine and tyrosine protein kinase.
    
 0.508
LOC103146054
Protein tyrosine phosphatase receptor type Fb.
    
 0.502
ENSPFOP00000000910
Ig-like domain-containing protein.
    
 0.502
ENSPFOP00000002324
Uncharacterized protein.
    
 0.502
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.502
ENSPFOP00000012155
Protein tyrosine phosphatase receptor type Sa.
    
 0.502
PTPRD-2
Uncharacterized protein.
    
 0.502
LOC103129985
Protein tyrosine phosphatase receptor type Sa.
    
 0.502
LOC103156223
Uncharacterized protein.
    
 0.502
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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