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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001396ATP/GTP binding protein-like 5. (616 aa)    
Predicted Functional Partners:
ENSPFOP00000019542
Hexosyltransferase.
      
 0.522
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.483
ythdc1
YTH domain containing 1.
      
 0.473
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.463
ttll6
Tubulin tyrosine ligase-like family, member 6.
      
 0.459
armc2
Armadillo repeat containing 2.
      
 0.459
ttll5
Tubulin tyrosine ligase-like family, member 5.
      
 0.456
lxn
Latexin.
    
 
 0.435
cep41
Centrosomal protein 41.
      
 0.432
LOC103141776
Mitochondrial ribosomal protein S27.
     
 0.431
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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