Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001396ATP/GTP binding protein-like 5. (616 aa)    
Predicted Functional Partners:
LOC103132208
Fleer.
      
 0.724
ENSPFOP00000003949
ElaC ribonuclease Z 2.
     
 0.722
ENSPFOP00000019542
Hexosyltransferase.
      
 0.709
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
      
 0.700
ttll6
Tubulin tyrosine ligase-like family, member 6.
      
 0.694
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.691
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.669
LOC103151271
GLI pathogenesis related 1; Belongs to the CRISP family.
      
 0.657
ENSPFOP00000029976
GLI pathogenesis related 1; Belongs to the CRISP family.
      
 0.657
ythdc1
YTH domain containing 1.
      
 0.616
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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