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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103143006Uncharacterized protein. (1130 aa)    
Predicted Functional Partners:
DSC1
Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
0.865
LOC103131252
Junction plakoglobin a.
    
 0.829
ENSPFOP00000016630
Uncharacterized protein.
   
 0.818
PKP1
Plakophilin 1.
   
 0.770
LOC103134601
Plakophilin 1b.
   
 0.759
LOC103149202
Plakophilin 3b.
   
 0.743
PKP3
Plakophilin 3.
   
 0.743
LOC103135024
Uncharacterized protein.
    
 0.679
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.679
ENSPFOP00000000175
Uncharacterized protein.
    
 0.645
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.