Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc35f4Solute carrier family 35 member F4. (497 aa)    
Predicted Functional Partners:
ENSPFOP00000002217
Uncharacterized protein.
      
 0.712
ENSPFOP00000006424
EBNA1 binding protein 2.
      
 0.712
anapc13
Anaphase promoting complex subunit 13.
      
 0.710
cdc42se2
CDC42 small effector 2.
      
 0.710
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
      
 0.691
ENSPFOP00000002725
Transmembrane protein 266.
      
 0.690
bud13
BUD13 homolog.
      
 0.689
kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.688
ENSPFOP00000019108
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
      
 0.687
stard3nl
STARD3 N-terminal like.
      
 0.686
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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