rhebl1 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rhebl1

Ras homolog, mTORC1 binding like 1. (184 aa)

Predicted Functional Partners:

tsc2

0.998

mtor

0.992

mlst8

0.985

ENSPFOP00000016945

0.985

LOC103131447

0.980

akt1s1

0.979

tbc1d7

0.969

bnip3

0.956

ENSPFOP00000011292

0.940

ENSPFOP00000011466

0.940

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000011292	ENSPFOP00000011466	ENSPFOP00000011292	ENSPFOP00000011466	DEP domain containing MTOR-interacting protein.	DEP domain containing MTOR-interacting protein.	0.900
ENSPFOP00000011292	ENSPFOP00000016945	ENSPFOP00000011292	ENSPFOP00000016945	DEP domain containing MTOR-interacting protein.	Regulatory associated protein of MTOR, complex 1.	0.978
ENSPFOP00000011292	akt1s1	ENSPFOP00000011292	ENSPFOP00000011583	DEP domain containing MTOR-interacting protein.	AKT1 substrate 1 (proline-rich).	0.976
ENSPFOP00000011292	mlst8	ENSPFOP00000011292	ENSPFOP00000014281	DEP domain containing MTOR-interacting protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.981
ENSPFOP00000011292	mtor	ENSPFOP00000011292	ENSPFOP00000008461	DEP domain containing MTOR-interacting protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.989
ENSPFOP00000011292	rhebl1	ENSPFOP00000011292	ENSPFOP00000001415	DEP domain containing MTOR-interacting protein.	Ras homolog, mTORC1 binding like 1.	0.940
ENSPFOP00000011292	tsc2	ENSPFOP00000011292	ENSPFOP00000006576	DEP domain containing MTOR-interacting protein.	TSC complex subunit 2.	0.604
ENSPFOP00000011466	ENSPFOP00000011292	ENSPFOP00000011466	ENSPFOP00000011292	DEP domain containing MTOR-interacting protein.	DEP domain containing MTOR-interacting protein.	0.900
ENSPFOP00000011466	ENSPFOP00000016945	ENSPFOP00000011466	ENSPFOP00000016945	DEP domain containing MTOR-interacting protein.	Regulatory associated protein of MTOR, complex 1.	0.978
ENSPFOP00000011466	akt1s1	ENSPFOP00000011466	ENSPFOP00000011583	DEP domain containing MTOR-interacting protein.	AKT1 substrate 1 (proline-rich).	0.976
ENSPFOP00000011466	mlst8	ENSPFOP00000011466	ENSPFOP00000014281	DEP domain containing MTOR-interacting protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.981
ENSPFOP00000011466	mtor	ENSPFOP00000011466	ENSPFOP00000008461	DEP domain containing MTOR-interacting protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.989
ENSPFOP00000011466	rhebl1	ENSPFOP00000011466	ENSPFOP00000001415	DEP domain containing MTOR-interacting protein.	Ras homolog, mTORC1 binding like 1.	0.940
ENSPFOP00000011466	tsc2	ENSPFOP00000011466	ENSPFOP00000006576	DEP domain containing MTOR-interacting protein.	TSC complex subunit 2.	0.604
ENSPFOP00000016945	ENSPFOP00000011292	ENSPFOP00000016945	ENSPFOP00000011292	Regulatory associated protein of MTOR, complex 1.	DEP domain containing MTOR-interacting protein.	0.978
ENSPFOP00000016945	ENSPFOP00000011466	ENSPFOP00000016945	ENSPFOP00000011466	Regulatory associated protein of MTOR, complex 1.	DEP domain containing MTOR-interacting protein.	0.978
ENSPFOP00000016945	LOC103131447	ENSPFOP00000016945	ENSPFOP00000000213	Regulatory associated protein of MTOR, complex 1.	Uncharacterized protein.	0.878
ENSPFOP00000016945	akt1s1	ENSPFOP00000016945	ENSPFOP00000011583	Regulatory associated protein of MTOR, complex 1.	AKT1 substrate 1 (proline-rich).	0.999
ENSPFOP00000016945	mlst8	ENSPFOP00000016945	ENSPFOP00000014281	Regulatory associated protein of MTOR, complex 1.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.999
ENSPFOP00000016945	mtor	ENSPFOP00000016945	ENSPFOP00000008461	Regulatory associated protein of MTOR, complex 1.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.999