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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfp64Zinc finger protein 64 homolog (mouse). (661 aa)    
Predicted Functional Partners:
ENSPFOP00000000686
Adenylate kinase 9.
    
  0.589
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
  0.589
ENSPFOP00000028219
Uncharacterized protein.
    
  0.588
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.548
YTHDC2
YTH domain containing 2.
    
  0.531
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.521
ENSPFOP00000027390
General transcription factor IIIC, polypeptide 5.
   
 0.520
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.509
LOC103131426
Cytochrome b5 reductase 4.
    
  0.507
ATP9A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.474
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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