Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001417PWWP domain-containing protein. (1392 aa)    
Predicted Functional Partners:
cdk13
Cyclin-dependent kinase 13.
    
 
 0.594
ENSPFOP00000024829
Cyclin-dependent kinase 12.
    
 
 0.594
LOC103133395
RRM domain-containing protein.
   
   0.515
LOC103143640
Polymerase (DNA-directed), delta interacting protein 3.
   
   0.515
ENSPFOP00000028952
Aly/REF export factor.
   
   0.515
rbbp5
Retinoblastoma binding protein 5.
    
 0.492
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
  0.481
ENSPFOP00000006792
Lysine (K)-specific methyltransferase 2Bb.
   
  0.474
LOC103146865
Lysine (K)-specific methyltransferase 2Ba.
   
  0.474
kmt2a
Lysine (K)-specific methyltransferase 2A.
   
  0.474
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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