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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo3LIM domain only 3. (156 aa)    
Predicted Functional Partners:
LOC103150493
LIM-domain binding 1b.
    
 0.908
LOC103152234
LIM domain binding 1a.
    
 0.908
LOC103137320
LIM domain binding 2a.
    
 0.908
LOC103148292
T-cell acute lymphocytic leukemia 1.
    
 0.818
ENSPFOP00000015509
GATA binding protein 1a.
    
 0.743
ENSPFOP00000013014
GATA binding protein 3.
    
 0.717
ENSPFOP00000003217
GATA binding protein 2a.
    
 0.693
GATA2
GATA binding protein 2.
    
 0.693
LOC103149824
Transcription factor 3b.
    
 0.664
TCF3
Transcription factor 3a.
    
 0.664
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.