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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103154654Tumor necrosis factor b (TNF superfamily, member 2). (249 aa)    
Predicted Functional Partners:
LOC103155324
TNFR-Cys domain-containing protein.
   
 0.950
ENSPFOP00000023509
Uncharacterized protein.
   
 0.942
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.941
LOC103136547
Tumor necrosis factor receptor superfamily, member 1B.
  
  
 0.908
ltbr
Uncharacterized protein.
   
 0.885
ENSPFOP00000008503
TNFR-Cys domain-containing protein.
  
 0.832
ENSPFOP00000025721
Death domain-containing protein.
    
 0.828
LOC103150965
CD40 molecule, TNF receptor superfamily member 5.
   
 0.805
LOC103137045
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.799
LOC103149726
Uncharacterized protein.
   
 0.798
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.