Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001431Lysyl oxidase-like 4. (763 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
  0.793
ENSPFOP00000001088
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
  0.679
ENSPFOP00000015675
Uncharacterized protein.
    
 0.635
ENSPFOP00000002611
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
   0.543
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.492
ENSPFOP00000004887
Sphingomyelin phosphodiesterase 3, neutral.
      
 0.489
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.474
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.474
ENSPFOP00000015763
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.457
ENSPFOP00000028219
Uncharacterized protein.
    
  0.455
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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