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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lppLIM domain containing preferred translocation partner in lipoma. (568 aa)    
Predicted Functional Partners:
ENSPFOP00000007358
HAUS augmin-like complex, subunit 3.
   
 0.836
haus1
HAUS augmin-like complex, subunit 1.
   
 0.833
ENSPFOP00000018651
Uncharacterized protein.
    
 0.816
rbm42
RNA binding motif protein 42.
   
 0.772
haus5
HAUS augmin-like complex, subunit 5.
   
 0.772
lats1
Large tumor suppressor kinase 1.
    
 0.746
ENSPFOP00000018229
Large tumor suppressor kinase 2.
    
 0.746
ENSPFOP00000002129
Enah/Vasp-like b.
    
 0.738
EVL
Enah/Vasp-like.
    
 0.738
LOC103154596
Vasodilator stimulated phosphoprotein b.
    
 0.738
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.