Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC103131613Protein phosphatase 6, regulatory subunit 2a. (882 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
   
 0.933
LOC103131314
Serine/threonine-protein phosphatase.
   
 0.933
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
   0.765
ENSPFOP00000000291
Ankyrin repeat domain 44.
    
 0.706
ENSPFOP00000000863
ANK_REP_REGION domain-containing protein.
    
 0.706
ENSPFOP00000005934
Ankyrin repeat domain 28b.
    
 0.706
ENSPFOP00000010779
Ankyrin repeat domain 52a.
    
 0.706
ANKRD66
Ankyrin repeat domain 66.
    
 0.706
LOC103144288
ANK_REP_REGION domain-containing protein.
    
 0.706
ENSPFOP00000022856
ANK_REP_REGION domain-containing protein.
    
 0.706
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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