STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001435Integrin, alpha V; Belongs to the integrin alpha chain family. (1046 aa)    
Predicted Functional Partners:
ENSPFOP00000001450
Integrin beta; Belongs to the integrin beta chain family.
    
 0.977
ENSPFOP00000029475
Integrin beta; Belongs to the integrin beta chain family.
   
 0.975
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.971
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.969
LOC103142160
Integrin beta; Belongs to the integrin beta chain family.
   
 0.968
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
LOC103138021
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
LOC103143542
Fibronectin 1b.
    
 0.952
LOC103156140
Laminin subunit gamma 2.
    
 0.934
lamb1
Laminin, beta 1a.
    
 0.932
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.