STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001435Integrin, alpha V; Belongs to the integrin alpha chain family. (1046 aa)    
Predicted Functional Partners:
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.984
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.982
LOC103142160
Integrin beta; Belongs to the integrin beta chain family.
   
 0.982
ENSPFOP00000029475
Integrin beta; Belongs to the integrin beta chain family.
   
 0.982
ENSPFOP00000001450
Integrin beta; Belongs to the integrin beta chain family.
    
 0.979
LOC103139167
Vitronectin b.
    
 0.973
vtn
Vitronectin a.
    
 0.972
LOC103143542
Fibronectin 1b.
    
 0.969
LOC103141903
Tenascin C.
    
 0.962
LOC103145329
Fibronectin 1a.
    
 0.962
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.