Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155735Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.887
ENSPFOP00000000131
Fibrillarin.
   
 
 0.861
LOC103152383
Mothers against decapentaplegic homolog.
    
 0.788
smad2
Mothers against decapentaplegic homolog.
    
 0.788
LOC103146727
Mothers against decapentaplegic homolog 2-like.
    
 0.788
SMAD3
Mothers against decapentaplegic homolog.
    
 0.788
smad3
Mothers against decapentaplegic homolog.
    
 0.788
ENSPFOP00000019692
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 0.763
nedd4
E3 ubiquitin-protein ligase.
    
 
 0.760
ENSPFOP00000008233
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.760
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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