Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103143842Fibrinogen C-terminal domain-containing protein. (432 aa)    
Predicted Functional Partners:
angptl4
Angiopoietin-like 4.
  
  
 
0.903
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
      
 0.687
ENSPFOP00000008171
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
      
 0.654
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.591
CTNND1
Catenin delta 1.
     
  0.586
LOC103132666
Catenin (cadherin-associated protein), delta 1.
     
  0.586
ARVCF
ARVCF delta catenin family member b.
     
  0.586
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.582
LOC103131252
Junction plakoglobin a.
   
 
 0.578
mcrs1
Microspherule protein 1.
    
  0.578
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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